Golden Spike Experiment

• The publication is now available at Genome Biology.
• Download the raw *.CEL files described in the publication. This file is about 20 Mb in size.
• Download the 10 best expression summary datasets depicted in Figure 7F of the manuscript. These are R data files (use the "load" command to import them).
• Assignment of probe sets to clones and fold change values.
  1. R data file, containing a vector called "mapping.unique" with names = probe set names and values = fold changes, with "-1" depicting probe sets whose target RNAs were not spiked in ("empty"), and "-2" marking "mixed" probe sets.
  2. Probe set-to-clone mappings, in tab-delimited text and Excel file formats.
• Unix: Installation instructions for the "goldenspike" R package.
• R scripts for generating expression summary datasets and re-creating figure 7 from the manuscript.